Sequence Similarity Clusters for the Entities in PDB 4HAZ

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 51 496
95 % 12 74 320
90 % 12 78 319
70 % 12 81 353
50 % 12 81 409
40 % 13 82 426
30 % 219 782 16
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 11 5811
95 % 5 31 1800 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 5 31 1838
70 % 5 31 1869
50 % 5 32 1768
40 % 5 32 1775
30 % 5 32 1722
Entity #3 | Chains: C
Exportin-1 protein, length: 1023 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49813
95 % 5 34 1546 Flexibility: Low
Max RMSD: 6.9, Avg RMSD: 1.2
PDBFlex
90 % 5 34 1577
70 % 5 34 1575
50 % 5 34 1615
40 % 5 47 1078
30 % 5 47 1059

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.