Sequence Similarity Clusters for the Entities in PDB 4HAV

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 40 529
95 % 17 63 304
90 % 17 66 315
70 % 17 69 327
50 % 17 69 358
40 % 18 70 380
30 % 250 713 14
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 11 5110
95 % 7 20 2830
90 % 7 20 2872
70 % 7 20 2865
50 % 7 21 2515
40 % 7 21 2498
30 % 7 21 2333
Entity #3 | Chains: C
Exportin-1 protein, length: 1023 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 22340
95 % 7 22 2287
90 % 7 22 2328
70 % 7 22 2335
50 % 7 22 2330
40 % 7 35 1243
30 % 7 35 1224

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.