Sequence Similarity Clusters for the Entities in PDB 4HAV

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 39 509
95 % 17 62 301
90 % 17 65 309
70 % 17 68 321
50 % 17 68 346
40 % 18 69 367
30 % 247 697 14
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 11 4952
95 % 7 19 2883
90 % 7 19 2925
70 % 7 19 2916
50 % 7 20 2557
40 % 7 20 2546
30 % 7 20 2381
Entity #3 | Chains: C
Exportin-1 protein, length: 1023 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 21752
95 % 7 21 2300
90 % 7 21 2338
70 % 7 21 2338
50 % 7 21 2344
40 % 7 34 1250
30 % 7 34 1227

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.