Sequence Similarity Clusters for the Entities in PDB 4HAV

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 40 580
95 % 17 63 314
90 % 17 66 326
70 % 17 69 352
50 % 17 69 411
40 % 18 70 435
30 % 252 728 15
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 11 5333
95 % 7 20 2975
90 % 7 20 3017
70 % 7 20 2990
50 % 7 21 2627
40 % 7 21 2596
30 % 7 21 2428
Entity #3 | Chains: C
Exportin-1 protein, length: 1023 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 23207
95 % 7 22 2440
90 % 7 22 2490
70 % 7 22 2474
50 % 7 22 2433
40 % 7 35 1293
30 % 7 35 1272

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.