Sequence Similarity Clusters for the Entities in PDB 4H9S

Entity #1 | Chains: A,B
Histone H3.3 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44983
95 % 38 158 75 Flexibility: Low
Max RMSD: 11.4, Avg RMSD: 1.2
PDBFlex
90 % 38 161 76
70 % 38 162 89
50 % 38 165 125
40 % 38 165 143
30 % 38 165 157
Entity #2 | Chains: C,D
Histone H4 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 13 2033
95 % 5 14 2361 Flexibility: Low
Max RMSD: 6.6, Avg RMSD: 2.2
PDBFlex
90 % 6 15 2349
70 % 6 15 2344
50 % 6 15 2321
40 % 6 15 2308
30 % 6 15 2206
Entity #3 | Chains: E,F
Death domain-associated protein 6 protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 10473
95 % 6 8 7813 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 6 8 7760
70 % 6 8 7536
50 % 6 8 6939
40 % 6 8 6442
30 % 6 8 5753

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.