Sequence Similarity Clusters for the Entities in PDB 4H9S

Entity #1 | Chains: A,B
Histone H3.3 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46533
95 % 38 166 77 Flexibility: Low
Max RMSD: 11.4, Avg RMSD: 1.2
PDBFlex
90 % 38 169 80
70 % 38 170 94
50 % 38 174 124
40 % 38 174 144
30 % 38 174 151
Entity #2 | Chains: C,D
Histone H4 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 17 1502
95 % 5 18 1912 Flexibility: Low
Max RMSD: 6.6, Avg RMSD: 2.2
PDBFlex
90 % 6 19 1896
70 % 6 19 1915
50 % 6 19 1938
40 % 6 19 1934
30 % 6 19 1865
Entity #3 | Chains: E,F
Death domain-associated protein 6 protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 10907
95 % 6 8 8101 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 6 8 8038
70 % 6 8 7795
50 % 6 8 7185
40 % 6 8 6666
30 % 6 8 5953

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures