Sequence Similarity Clusters for the Entities in PDB 4H9S

Entity #1 | Chains: A,B
Histone H3.3 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45656
95 % 38 164 75 Flexibility: Low
Max RMSD: 11.4, Avg RMSD: 1.2
PDBFlex
90 % 38 167 78
70 % 38 168 93
50 % 38 172 122
40 % 38 172 144
30 % 38 172 150
Entity #2 | Chains: C,D
Histone H4 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 13 2075
95 % 5 14 2408 Flexibility: Low
Max RMSD: 6.6, Avg RMSD: 2.2
PDBFlex
90 % 6 15 2391
70 % 6 15 2391
50 % 6 15 2370
40 % 6 15 2353
30 % 6 15 2245
Entity #3 | Chains: E,F
Death domain-associated protein 6 protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 10639
95 % 6 8 7931 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 6 8 7873
70 % 6 8 7640
50 % 6 8 7039
40 % 6 8 6537
30 % 6 8 5833

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures