Sequence Similarity Clusters for the Entities in PDB 4H9Q

Entity #1 | Chains: A
Histone H3.3 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 43429
95 % 3 149 76 Flexibility: Low
Max RMSD: 11.4, Avg RMSD: 1.3
PDBFlex
90 % 3 152 78
70 % 3 153 96
50 % 3 156 132
40 % 3 156 146
30 % 3 156 162
Entity #2 | Chains: B
Histone H4 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 140 75
95 % 3 159 73 Flexibility: Low
Max RMSD: 13.3, Avg RMSD: 1.2
PDBFlex
90 % 3 164 75
70 % 3 164 87
50 % 3 164 122
40 % 3 164 140
30 % 3 164 156
Entity #3 | Chains: C
Death domain-associated protein 6 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39639
95 % 2 8 7476 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 2 8 7435
70 % 2 8 7219
50 % 2 8 6667
40 % 2 8 6197
30 % 2 8 5540

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.