Sequence Similarity Clusters for the Entities in PDB 4H9O

Entity #1 | Chains: A
Histone H3.3 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64740
95 % 5 150 77 Flexibility: Low
Max RMSD: 11.4, Avg RMSD: 1.2
PDBFlex
90 % 5 153 78
70 % 5 154 96
50 % 5 157 131
40 % 5 157 147
30 % 5 157 160
Entity #2 | Chains: B
Histone H4 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 141 76
95 % 5 160 75 Flexibility: Low
Max RMSD: 13.3, Avg RMSD: 1.2
PDBFlex
90 % 5 165 75
70 % 5 165 86
50 % 5 165 123
40 % 5 165 139
30 % 5 165 153
Entity #3 | Chains: C
Death domain-associated protein 6 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 10257
95 % 3 8 7640 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 3 8 7594
70 % 3 8 7352
50 % 3 8 6777
40 % 3 8 6297
30 % 3 8 5628

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.