Sequence Similarity Clusters for the Entities in PDB 4H9O

Entity #1 | Chains: A
Histone H3.3 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 70 206
95 % 5 164 75 Flexibility: Low
Max RMSD: 11.4, Avg RMSD: 1.2
PDBFlex
90 % 5 167 78
70 % 5 168 95
50 % 5 172 124
40 % 5 172 143
30 % 5 172 158
Entity #2 | Chains: B
Histone H4 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 174 57
95 % 5 177 67 Flexibility: Low
Max RMSD: 13.3, Avg RMSD: 1.2
PDBFlex
90 % 5 181 68
70 % 5 181 84
50 % 5 181 113
40 % 5 181 138
30 % 5 181 149
Entity #3 | Chains: C
Death domain-associated protein 6 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 8 7713
95 % 3 8 7789 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 3 8 7720
70 % 3 8 7475
50 % 3 8 6880
40 % 3 8 6353
30 % 3 8 5575

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures