Sequence Similarity Clusters for the Entities in PDB 4H9N

Entity #1 | Chains: A
Histone H3.3 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 12172
95 % 2 192 71 Flexibility: Low
Max RMSD: 11.4, Avg RMSD: 1.1
PDBFlex
90 % 2 199 71
70 % 2 202 83
50 % 2 206 111
40 % 2 206 131
30 % 2 206 144
Entity #2 | Chains: B
Histone H4 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 205 49
95 % 2 208 60 Flexibility: Low
Max RMSD: 13.3, Avg RMSD: 1.2
PDBFlex
90 % 2 216 64
70 % 2 216 75
50 % 2 216 104
40 % 2 216 124
30 % 2 216 138
Entity #3 | Chains: C
Death domain-associated protein 6 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 8545
95 % 1 8 8597 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 1 8 8498
70 % 1 8 8207
50 % 1 8 7479
40 % 1 8 6896
30 % 1 8 6007

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures