Sequence Similarity Clusters for the Entities in PDB 4H6J

Entity #1 | Chains: A
HYPOXIA INDUCIBLE FACTOR 1-ALPHA protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66427
95 % 1 1 45750
90 % 1 1 43439
70 % 6 15 4054
50 % 7 16 3424
40 % 7 16 3312
30 % 15 40 1176
Entity #2 | Chains: B
ARYL HYDROCARBON NUCLEAR TRANSLOCATOR protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66127
95 % 7 19 2508 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 7 19 2560
70 % 7 19 2544
50 % 7 19 2514
40 % 7 19 2468
30 % 16 40 1176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.