Sequence Similarity Clusters for the Entities in PDB 4H6J

Entity #1 | Chains: A
HYPOXIA INDUCIBLE FACTOR 1-ALPHA protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57911
95 % 1 1 47411
90 % 1 1 45049
70 % 6 15 4044
50 % 7 16 3469
40 % 7 16 3330
30 % 15 40 1254
Entity #2 | Chains: B
ARYL HYDROCARBON NUCLEAR TRANSLOCATOR protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51160
95 % 7 19 2568 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 7 19 2641
70 % 7 19 2618
50 % 7 19 2681
40 % 7 20 2495
30 % 16 40 1254

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures