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Crystal Structure of HIV-1 Reverse Transcriptase (RT) in Complex with (E)-3-(3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)- 4-fluorophenoxy)-5-fluorophenyl)acrylonitrile (JLJ506), A Non-nucleoside inhibitor
Sequence Clustering and Redundancy Reduction Results
4H4O
Sequence Clusters for the Sequence Entities in PDB 4H4O
Entity #1: Chains: A - Reverse transcriptase/ribonuclease H, Exoribonuclease H, p66 RT protein, length: 557 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 19 23 1351
95% 136 200 60
90% 136 200 63
70% 136 200 76
50% 137 201 114
40% 137 201 138
30% 137 201 159
Entity #2: Chains: B - Reverse transcriptase/ribonuclease H, Exoribonuclease H, p51 RT protein, length: 428 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 37 65 257
95% 131 194 68
90% 131 194 72
70% 131 194 86
50% 132 195 117
40% 132 195 146
30% 132 195 170
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.