4H4O

Crystal Structure of HIV-1 Reverse Transcriptase (RT) in Complex with (E)-3-(3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)- 4-fluorophenoxy)-5-fluorophenyl)acrylonitrile (JLJ506), A Non-nucleoside inhibitor


Sequence Similarity Clusters for the Entities in PDB 4H4O

Entity #1 | Chains: A
Reverse transcriptase/ribonuclease H, Exoribonuclease H, p66 RT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 33 1106
95 % 156 231 107
90 % 156 231 112
70 % 156 231 129
50 % 157 232 157
40 % 157 232 171
30 % 157 232 189
Entity #2 | Chains: B
Reverse transcriptase/ribonuclease H, Exoribonuclease H, p51 RT protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 88 224
95 % 151 225 116
90 % 151 225 119
70 % 151 225 136
50 % 152 226 165
40 % 152 226 180
30 % 152 226 198

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.