Sequence Similarity Clusters for the Entities in PDB 4H3P

Entity #1 | Chains: A,D
Mitogen-activated protein kinase 1 protein, length: 362 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26085
95 % 77 112 283 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 1.6
PDBFlex
90 % 77 112 297
70 % 78 114 330
50 % 238 470 52
40 % 239 477 62
30 % 1898 3912 2
Entity #2 | Chains: B,E
Ribosomal protein S6 kinase alpha-1 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49755
95 % 1 1 37256
90 % 1 2 24411
70 % 1 2 22183
50 % 1 2 19207
40 % 1 2 17109
30 % 1 2 14692

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures