Sequence Similarity Clusters for the Entities in PDB 4H3P

Entity #1 | Chains: A,D
Mitogen-activated protein kinase 1 protein, length: 362 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25324
95 % 77 112 271 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 1.6
PDBFlex
90 % 77 112 283
70 % 78 114 306
50 % 231 458 54
40 % 232 465 64
30 % 1825 3777 2
Entity #2 | Chains: B,E
Ribosomal protein S6 kinase alpha-1 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48463
95 % 1 1 36285
90 % 1 2 23680
70 % 1 2 21637
50 % 1 2 18776
40 % 1 2 16731
30 % 1 2 14369

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.