Sequence Similarity Clusters for the Entities in PDB 4H3P

Entity #1 | Chains: A,D
Mitogen-activated protein kinase 1 protein, length: 362 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 10999
95 % 78 113 290 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 1.6
PDBFlex
90 % 78 113 302
70 % 79 115 337
50 % 242 476 66
40 % 243 484 84
30 % 2117 4300 2
Entity #2 | Chains: B,E
Ribosomal protein S6 kinase alpha-1 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26675
95 % 1 2 23490
90 % 1 2 22731
70 % 1 2 20698
50 % 1 2 17812
40 % 1 2 15762
30 % 1 2 13212

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures