Sequence Similarity Clusters for the Entities in PDB 4H20

Entity #1 | Chains: L
Light chain of Fab Fragment from the anti-Ricin Monoclonal Antibody RAC18 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48778
95 % 2 18 3009 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.3
PDBFlex
90 % 11 65 560
70 % 421 2519 1
50 % 861 5107 1
40 % 1048 5756 1
30 % 1283 7175 1
Entity #2 | Chains: H
Heavy chain of Fab Fragment from the anti-Ricin Monoclonal Antibody RAC18 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61057
95 % 1 1 49770
90 % 1 1 47228
70 % 421 2478 2
50 % 862 5107 1
40 % 1049 5756 1
30 % 1284 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures