Sequence Similarity Clusters for the Entities in PDB 4H1L

Entity #1 | Chains: A,D
HLA class II histocompatibility antigen, DR alpha chain protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 67 227
95 % 71 74 292
90 % 87 90 176
70 % 87 90 209
50 % 132 137 171
40 % 132 137 187
30 % 275 286 70
Entity #2 | Chains: B,E
MHC class II antigen protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24644
95 % 5 5 6826
90 % 69 71 316
70 % 123 128 159
50 % 132 137 170
40 % 132 137 186
30 % 276 286 70
Entity #3 | Chains: C,F
mimotope peptide protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: G,I
Ani2.3 TCR A chain protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40899
95 % 1 1 30653
90 % 1 1 29362
70 % 7 7 3349
50 % 11 11 2467
40 % 666 758 5
30 % 741 870 8
Entity #5 | Chains: H,J
Ani2.3 TCR B chain protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40991
95 % 1 1 30720
90 % 1 1 29423
70 % 1 1 26322
50 % 25 25 889
40 % 25 25 912
30 % 742 870 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.