Sequence Similarity Clusters for the Entities in PDB 4H1L

Entity #1 | Chains: A,D
HLA class II histocompatibility antigen, DR alpha chain protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 66 69 236
95 % 73 76 310
90 % 89 92 238
70 % 89 92 273
50 % 139 144 180
40 % 139 144 195
30 % 289 300 91
Entity #2 | Chains: B,E
MHC class II antigen protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26637
95 % 5 5 7405
90 % 71 73 337
70 % 130 135 166
50 % 139 144 179
40 % 139 144 194
30 % 290 300 91
Entity #3 | Chains: C,F
mimotope peptide protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: G,I
Ani2.3 TCR A chain protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44089
95 % 1 1 33012
90 % 1 1 31598
70 % 7 7 3607
50 % 11 11 2688
40 % 723 848 5
30 % 807 974 7
Entity #5 | Chains: H,J
Ani2.3 TCR B chain protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44186
95 % 1 1 33082
90 % 1 1 31663
70 % 1 1 28290
50 % 25 25 995
40 % 25 25 1010
30 % 808 974 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.