Sequence Similarity Clusters for the Entities in PDB 4H1L

Entity #1 | Chains: A,D
HLA class II histocompatibility antigen, DR alpha chain protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 66 69 223
95 % 73 76 297
90 % 89 92 228
70 % 89 92 262
50 % 137 142 175
40 % 137 142 189
30 % 285 296 95
Entity #2 | Chains: B,E
MHC class II antigen protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26008
95 % 5 5 7214
90 % 71 73 324
70 % 128 133 163
50 % 137 142 174
40 % 137 142 188
30 % 286 296 95
Entity #3 | Chains: C,F
mimotope peptide protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: G,I
Ani2.3 TCR A chain protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43028
95 % 1 1 32197
90 % 1 1 30830
70 % 7 7 3533
50 % 11 11 2615
40 % 707 831 5
30 % 791 957 8
Entity #5 | Chains: H,J
Ani2.3 TCR B chain protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43123
95 % 1 1 32265
90 % 1 1 30892
70 % 1 1 27636
50 % 25 25 958
40 % 25 25 977
30 % 792 957 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.