Sequence Similarity Clusters for the Entities in PDB 4H1L

Entity #1 | Chains: A,D
HLA class II histocompatibility antigen, DR alpha chain protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 67 228
95 % 71 74 295
90 % 87 90 205
70 % 87 90 239
50 % 132 137 173
40 % 132 137 187
30 % 275 286 73
Entity #2 | Chains: B,E
MHC class II antigen protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24835
95 % 5 5 6883
90 % 69 71 320
70 % 123 128 160
50 % 132 137 172
40 % 132 137 186
30 % 276 286 73
Entity #3 | Chains: C,F
mimotope peptide protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: G,I
Ani2.3 TCR A chain protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41190
95 % 1 1 30850
90 % 1 1 29555
70 % 7 7 3365
50 % 11 11 2485
40 % 675 769 5
30 % 751 882 8
Entity #5 | Chains: H,J
Ani2.3 TCR B chain protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41282
95 % 1 1 30917
90 % 1 1 29616
70 % 1 1 26519
50 % 25 25 899
40 % 25 25 921
30 % 752 882 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.