Sequence Similarity Clusters for the Entities in PDB 4H1L

Entity #1 | Chains: A,D
HLA class II histocompatibility antigen, DR alpha chain protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 66 69 225
95 % 73 76 300
90 % 89 92 230
70 % 89 92 263
50 % 137 142 177
40 % 137 142 191
30 % 285 296 99
Entity #2 | Chains: B,E
MHC class II antigen protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26268
95 % 5 5 7257
90 % 71 73 327
70 % 128 133 164
50 % 137 142 176
40 % 137 142 190
30 % 286 296 99
Entity #3 | Chains: C,F
mimotope peptide protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: G,I
Ani2.3 TCR A chain protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43457
95 % 1 1 32555
90 % 1 1 31179
70 % 7 7 3550
50 % 11 11 2637
40 % 714 840 5
30 % 798 966 7
Entity #5 | Chains: H,J
Ani2.3 TCR B chain protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43554
95 % 1 1 32625
90 % 1 1 31243
70 % 1 1 27933
50 % 25 25 973
40 % 25 25 992
30 % 799 966 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.