POP-OUT | CLOSE

An Information Portal to 105906 Biological Macromolecular Structures

Crystal Structure of the Cytochrome b6f Complex from Mastigocladus laminosus with TDS
Sequence Clustering and Redundancy Reduction Results
4H13
Sequence Clusters for the Sequence Entities in PDB 4H13
Entity #1: Chains: A - Cytochrome b6 protein, length: 215 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4196
95% 4 12 3544
90% 4 12 3572
70% 4 13 3311
50% 4 13 3269
40% 4 13 3144
30% 4 13 2912
Entity #2: Chains: B - Cytochrome b6-f complex subunit 4 protein, length: 160 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 7 7890
95% 2 9 4839
90% 4 12 3618
70% 4 13 3332
50% 4 13 3291
40% 4 13 3168
30% 4 13 2934
Entity #3: Chains: C - Apocytochrome f protein, length: 289 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4156
95% 2 9 4749
90% 2 9 4763
70% 3 11 3771
50% 3 12 3433
40% 3 12 3302
30% 3 12 3059
Entity #4: Chains: D - Cytochrome b6-f complex iron-sulfur subunit protein, length: 179 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 7 7860
95% 2 9 4825
90% 2 9 4843
70% 4 12 3578
50% 4 12 3506
40% 4 12 3358
30% 4 12 3104
Entity #5: Chains: E - Cytochrome b6-f complex subunit 6 protein, length: 32 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4300
95% 2 9 4921
90% 2 9 4934
70% 2 9 4867
50% 2 9 4631
40% 2 9 4335
30% 2 9 3945
Entity #6: Chains: F - Cytochrome b6-f complex subunit 7 protein, length: 35 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4298
95% 2 9 4919
90% 2 9 4932
70% 4 12 3672
50% 4 12 3589
40% 4 12 3436
30% 4 12 3177
Entity #7: Chains: G - Cytochrome b6-f complex subunit 5 protein, length: 37 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4296
95% 2 9 4916
90% 2 9 4930
70% 4 12 3671
50% 4 12 3588
40% 4 12 3435
30% 4 12 3176
Entity #8: Chains: H - Cytochrome b6-f complex subunit 8 protein, length: 29 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4301
95% 2 9 4923
90% 2 9 4936
70% 4 12 3675
50% 4 12 3591
40% 4 12 3438
30% 4 12 3179
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.