POP-OUT | CLOSE

An Information Portal to 106858 Biological Macromolecular Structures

Crystal Structure of the Cytochrome b6f Complex from Mastigocladus laminosus with TDS
Sequence Clustering and Redundancy Reduction Results
4H13
Sequence Clusters for the Sequence Entities in PDB 4H13
Entity #1: Chains: A - Cytochrome b6 protein, length: 215 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4243
95% 4 12 3584
90% 4 12 3609
70% 4 13 3359
50% 4 13 3296
40% 4 13 3169
30% 4 13 2933
Entity #2: Chains: B - Cytochrome b6-f complex subunit 4 protein, length: 160 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 7 7999
95% 2 9 4881
90% 4 12 3653
70% 4 13 3381
50% 4 13 3319
40% 4 13 3194
30% 4 13 2956
Entity #3: Chains: C - Apocytochrome f protein, length: 289 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4201
95% 2 9 4789
90% 2 9 4803
70% 3 11 3808
50% 3 12 3459
40% 3 12 3327
30% 3 12 3080
Entity #4: Chains: D - Cytochrome b6-f complex iron-sulfur subunit protein, length: 179 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 7 7970
95% 2 9 4867
90% 2 9 4886
70% 4 12 3611
50% 4 12 3528
40% 4 12 3382
30% 4 12 3123
Entity #5: Chains: E - Cytochrome b6-f complex subunit 6 protein, length: 32 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4356
95% 2 9 4970
90% 2 9 4986
70% 2 9 4911
50% 2 9 4655
40% 2 9 4365
30% 2 9 3966
Entity #6: Chains: F - Cytochrome b6-f complex subunit 7 protein, length: 35 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4354
95% 2 9 4968
90% 2 9 4984
70% 4 12 3706
50% 4 12 3611
40% 4 12 3462
30% 4 12 3195
Entity #7: Chains: G - Cytochrome b6-f complex subunit 5 protein, length: 37 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4352
95% 2 9 4965
90% 2 9 4982
70% 4 12 3705
50% 4 12 3610
40% 4 12 3461
30% 4 12 3194
Entity #8: Chains: H - Cytochrome b6-f complex subunit 8 protein, length: 29 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 4357
95% 2 9 4972
90% 2 9 4988
70% 4 12 3710
50% 4 12 3614
40% 4 12 3465
30% 4 12 3198
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.