Sequence Similarity Clusters for the Entities in PDB 4GYP

Entity #1 | Chains: A,B
Glucarate dehydratase protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 2799
95 % 3 9 1866 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 9 1908
70 % 4 11 1605
50 % 8 22 708
40 % 8 22 737
30 % 116 238 29
Entity #2 | Chains: C,D
Glucarate dehydratase-related protein protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32984
95 % 1 2 6753 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 1 2 6733
70 % 1 5 2815
50 % 9 22 708
40 % 9 22 737
30 % 117 238 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures