Sequence Similarity Clusters for the Entities in PDB 4GY5

Entity #1 | Chains: A,B,C,D
E3 ubiquitin-protein ligase UHRF1 protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21399
95 % 2 2 9509 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 2 2 9413
70 % 2 2 9010
50 % 2 2 8161
40 % 3 3 6585
30 % 3 3 5890
Entity #2 | Chains: E,F
Peptide from Histone H3.3 protein, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures