Sequence Similarity Clusters for the Entities in PDB 4GY5

Entity #1 | Chains: A,B,C,D
E3 ubiquitin-protein ligase UHRF1 protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20062
95 % 2 2 8989 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 2 2 8909
70 % 2 2 8526
50 % 2 2 7724
40 % 3 3 6208
30 % 3 3 5560
Entity #2 | Chains: E,F
Peptide from Histone H3.3 protein, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.