Sequence Similarity Clusters for the Entities in PDB 4GUU

Entity #1 | Chains: A
Lysine-specific histone demethylase 1B protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 4022
95 % 5 10 4157 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.2
PDBFlex
90 % 5 10 4182
70 % 5 10 4096
50 % 5 10 3961
40 % 5 10 3795
30 % 5 10 3517
Entity #2 | Chains: B
Putative oxidoreductase GLYR1 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 15340
95 % 4 5 14382
90 % 4 5 14113
70 % 4 5 13229
50 % 4 5 11771
40 % 4 5 10674
30 % 4 5 9254

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.