Sequence Similarity Clusters for the Entities in PDB 4GUS

Entity #1 | Chains: A
Lysine-specific histone demethylase 1B protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 9 3949
95 % 4 10 4094
90 % 4 10 4115
70 % 4 10 4030
50 % 4 10 3899
40 % 4 10 3743
30 % 4 10 3469
Entity #2 | Chains: B
Putative oxidoreductase GLYR1 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 15079
95 % 3 5 14158
90 % 3 5 13897
70 % 3 5 13028
50 % 3 5 11614
40 % 3 5 10536
30 % 3 5 9124
Entity #3 | Chains: C
Histone H3.3 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 23646
95 % 12 34 851
90 % 12 34 885
70 % 12 34 915
50 % 12 34 968
40 % 12 34 987
30 % 12 34 963

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.