Sequence Similarity Clusters for the Entities in PDB 4GUS

Entity #1 | Chains: A
Lysine-specific histone demethylase 1B protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 9 4104
95 % 4 10 4226
90 % 4 10 4254
70 % 4 10 4183
50 % 4 10 4027
40 % 4 10 3853
30 % 4 10 3569
Entity #2 | Chains: B
Putative oxidoreductase GLYR1 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 15595
95 % 3 5 14627
90 % 3 5 14357
70 % 3 5 13473
50 % 3 5 11976
40 % 3 5 10866
30 % 3 5 9420
Entity #3 | Chains: C
Histone H3.3 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 24483
95 % 12 34 877
90 % 12 34 911
70 % 12 34 944
50 % 12 34 993
40 % 12 34 1014
30 % 12 34 985

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.