POP-OUT | CLOSE
 
Crystal structure of LSD2-NPAC with H3 in space group P21
Sequence Clustering and Redundancy Reduction Results
4GUR
Sequence Clusters for the Sequence Entities in PDB 4GUR
Entity #1: Chains: A - Lysine-specific histone demethylase 1B protein, length: 776 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 9 2910
95% 6 10 3048
90% 6 10 3084
70% 6 10 3083
50% 6 10 3074
40% 6 10 2979
30% 6 10 2768
Entity #2: Chains: B - Putative oxidoreductase GLYR1 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 11603
95% 5 5 11134
90% 5 5 10957
70% 5 5 10368
50% 5 5 9310
40% 5 5 8496
30% 5 5 7462
Entity #3: Chains: C - Histone H3.3 protein, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 18475
95% 10 25 746
90% 10 25 771
70% 10 25 806
50% 10 25 864
40% 10 25 887
30% 10 25 871
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.