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An Information Portal to 106082 Biological Macromolecular Structures

Crystal structure of LSD2-NPAC with H3 in space group P21
Sequence Clustering and Redundancy Reduction Results
4GUR
Sequence Clusters for the Sequence Entities in PDB 4GUR
Entity #1: Chains: A - Lysine-specific histone demethylase 1B protein, length: 776 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 9 3063
95% 6 10 3223
90% 6 10 3254
70% 6 10 3233
50% 6 10 3177
40% 6 10 3065
30% 6 10 2848
Entity #2: Chains: B - Putative oxidoreductase GLYR1 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 11928
95% 5 5 11410
90% 5 5 11229
70% 5 5 10610
50% 5 5 9536
40% 5 5 8701
30% 5 5 7626
Entity #3: Chains: C - Histone H3.3 protein, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 18958
95% 10 25 804
90% 10 25 838
70% 10 25 877
50% 10 25 934
40% 10 25 966
30% 10 25 947
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.