POP-OUT | CLOSE
 
Crystal structure of LSD2-NPAC with H3 in space group P21
Sequence Clustering and Redundancy Reduction Results
4GUR
Sequence Clusters for the Sequence Entities in PDB 4GUR
Entity #1: Chains: A - Lysine-specific histone demethylase 1B protein, length: 776 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 9 2976
95% 6 10 3117
90% 6 10 3152
70% 6 10 3138
50% 6 10 3100
40% 6 10 2999
30% 6 10 2788
Entity #2: Chains: B - Putative oxidoreductase GLYR1 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 11656
95% 5 5 11176
90% 5 5 10997
70% 5 5 10403
50% 5 5 9343
40% 5 5 8527
30% 5 5 7482
Entity #3: Chains: C - Histone H3.3 protein, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 18548
95% 10 25 785
90% 10 25 814
70% 10 25 854
50% 10 25 924
40% 10 25 952
30% 10 25 930
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.