Sequence Similarity Clusters for the Entities in PDB 4GUQ

Entity #1 | Chains: E,F
DNA (5'-D(P*GP*AP*AP*CP*AP*TP*GP*TP*TP*C)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
Tumor protein p73 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45988
95 % 10 10 1219 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.0
PDBFlex
90 % 10 10 1236
70 % 14 15 759
50 % 118 122 150
40 % 118 122 164
30 % 118 122 185

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures