Sequence Similarity Clusters for the Entities in PDB 4GUQ

Entity #1 | Chains: E,F
DNA (5'-D(P*GP*AP*AP*CP*AP*TP*GP*TP*TP*C)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
Tumor protein p73 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40960
95 % 10 10 1143 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.0
PDBFlex
90 % 10 10 1171
70 % 14 15 735
50 % 103 106 158
40 % 103 106 175
30 % 103 106 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.