POP-OUT | CLOSE

An Information Portal to 106082 Biological Macromolecular Structures

Crystal structure of LSD2 with H3
Sequence Clustering and Redundancy Reduction Results
4GU0
Sequence Clusters for the Sequence Entities in PDB 4GU0
Entity #1: Chains: A,B,C,D - Lysine-specific histone demethylase 1B protein, length: 776 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 9 3063
95% 10 10 3223
90% 10 10 3254
70% 10 10 3233
50% 10 10 3177
40% 10 10 3065
30% 10 10 2848
Entity #2: Chains: E,F - Histone H3.3 protein, length: 26 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 38312
95% 20 25 804
90% 20 25 838
70% 20 25 877
50% 20 25 934
40% 20 25 966
30% 20 25 947
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.