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An Information Portal to 111558 Biological Macromolecular Structures

Crystal structure of LSD2 with H3
Sequence Clustering and Redundancy Reduction Results
4GU0
Sequence Clusters for the Sequence Entities in PDB 4GU0
Entity #1: Chains: A,B,C,D - Lysine-specific histone demethylase 1B protein, length: 776 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 9 3295
95% 10 10 3450
90% 10 10 3483
70% 10 10 3444
50% 10 10 3337
40% 10 10 3211
30% 10 10 2988
Entity #2: Chains: E,F - Histone H3.3 protein, length: 26 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 40447
95% 20 25 871
90% 20 25 902
70% 20 25 941
50% 20 25 985
40% 20 25 1008
30% 20 25 989
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.