Sequence Similarity Clusters for the Entities in PDB 4GU0

Entity #1 | Chains: A,B,C,D
Lysine-specific histone demethylase 1B protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 9 3703
95 % 10 10 3820
90 % 10 10 3850
70 % 10 10 3785
50 % 10 10 3677
40 % 10 10 3533
30 % 10 10 3286
Entity #2 | Chains: E,F
Histone H3.3 protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44708
95 % 22 27 904
90 % 22 27 932
70 % 22 27 973
50 % 22 27 1018
40 % 22 27 1043
30 % 22 27 1030

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.