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An Information Portal to 105339 Biological Macromolecular Structures

Crystal structure of LSD2 with H3
Sequence Clustering and Redundancy Reduction Results
4GU0
Sequence Clusters for the Sequence Entities in PDB 4GU0
Entity #1: Chains: A,B,C,D - Lysine-specific histone demethylase 1B protein, length: 776 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 9 3025
95% 10 10 3174
90% 10 10 3205
70% 10 10 3188
50% 10 10 3144
40% 10 10 3044
30% 10 10 2828
Entity #2: Chains: E,F - Histone H3.3 protein, length: 26 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 38021
95% 20 25 794
90% 20 25 829
70% 20 25 870
50% 20 25 929
40% 20 25 961
30% 20 25 943
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.