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An Information Portal to 107620 Biological Macromolecular Structures

Crystal structure of LSD2 with H3
Sequence Clustering and Redundancy Reduction Results
4GU0
Sequence Clusters for the Sequence Entities in PDB 4GU0
Entity #1: Chains: A,B,C,D - Lysine-specific histone demethylase 1B protein, length: 776 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 9 3117
95% 10 10 3276
90% 10 10 3304
70% 10 10 3285
50% 10 10 3216
40% 10 10 3101
30% 10 10 2881
Entity #2: Chains: E,F - Histone H3.3 protein, length: 26 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 38836
95% 20 25 832
90% 20 25 862
70% 20 25 896
50% 20 25 943
40% 20 25 976
30% 20 25 960
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.