Sequence Similarity Clusters for the Entities in PDB 4GSW

Entity #1 | Chains: A,B
Ubiquitin protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28883
95 % 2 2 23937 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 2 23174
70 % 147 415 8
50 % 152 436 12
40 % 162 460 16
30 % 351 987 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.