Sequence Similarity Clusters for the Entities in PDB 4GSL

Entity #1 | Chains: A,B
Ubiquitin-like modifier-activating enzyme ATG7 protein, length: 615 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16526
95 % 1 4 10965 Flexibility: Medium
Max RMSD: 5.9, Avg RMSD: 3.7
PDBFlex
90 % 1 4 10828
70 % 1 4 10289
50 % 1 4 9313
40 % 1 4 8530
30 % 1 4 7511
Entity #2 | Chains: C,D
Autophagy-related protein 3 protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35939
95 % 2 2 22066 Flexibility: High
Max RMSD: 11.8, Avg RMSD: 11.8
PDBFlex
90 % 2 2 21442
70 % 2 2 19686
50 % 2 2 17075
40 % 2 2 15245
30 % 2 3 9088

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.