Sequence Similarity Clusters for the Entities in PDB 4GSL

Entity #1 | Chains: A,B
Ubiquitin-like modifier-activating enzyme ATG7 protein, length: 615 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16241
95 % 1 4 10792 Flexibility: Medium
Max RMSD: 5.9, Avg RMSD: 3.4
PDBFlex
90 % 1 4 10653
70 % 1 4 10095
50 % 1 4 9153
40 % 1 4 8385
30 % 1 4 7380
Entity #2 | Chains: C,D
Autophagy-related protein 3 protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35335
95 % 2 2 21649 Flexibility: High
Max RMSD: 11.8, Avg RMSD: 11.8
PDBFlex
90 % 2 2 21043
70 % 2 2 19376
50 % 2 2 16824
40 % 2 2 15027
30 % 2 3 8917

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.