Sequence Similarity Clusters for the Entities in PDB 4GSL

Entity #1 | Chains: A,B
Ubiquitin-like modifier-activating enzyme ATG7 protein, length: 615 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15983
95 % 1 4 10614 Flexibility: Medium
Max RMSD: 5.9, Avg RMSD: 3.0
PDBFlex
90 % 1 4 10474
70 % 1 4 9933
50 % 1 4 9023
40 % 1 4 8264
30 % 1 4 7272
Entity #2 | Chains: C,D
Autophagy-related protein 3 protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34845
95 % 2 2 21353 Flexibility: Medium
Max RMSD: 13.6, Avg RMSD: 8.7
PDBFlex
90 % 2 2 20766
70 % 2 2 19146
50 % 2 2 16634
40 % 2 2 14850
30 % 2 3 8791

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.