Sequence Similarity Clusters for the Entities in PDB 4GRG

Entity #1 | Chains: A,B
ANTI-IGE INHIBITOR E2_79 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42538
95 % 1 1 35698 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 34098
70 % 86 86 264
50 % 118 118 190
40 % 142 150 171
30 % 307 327 42
Entity #2 | Chains: C,D
Ig epsilon chain C region protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6949
95 % 16 16 906 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 16 16 940
70 % 16 16 969
50 % 16 16 1007
40 % 16 16 1029
30 % 6785 7240 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures