Sequence Similarity Clusters for the Entities in PDB 4GRG

Entity #1 | Chains: A,B
ANTI-IGE INHIBITOR E2_79 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45920
95 % 1 1 34457
90 % 1 1 32906
70 % 84 84 264
50 % 99 99 208
40 % 120 128 188
30 % 221 230 64
Entity #2 | Chains: C,D
Ig epsilon chain C region protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6550
95 % 16 16 884 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 16 16 918
70 % 16 16 946
50 % 16 16 982
40 % 16 16 1011
30 % 5520 5759 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures