Sequence Similarity Clusters for the Entities in PDB 4GRG

Entity #1 | Chains: A,B
ANTI-IGE INHIBITOR E2_79 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45025
95 % 1 1 33835
90 % 1 1 32343
70 % 77 77 280
50 % 92 92 219
40 % 113 121 193
30 % 211 220 68
Entity #2 | Chains: C,D
Ig epsilon chain C region protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6413
95 % 12 12 1148 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 12 12 1176
70 % 12 12 1209
50 % 12 12 1262
40 % 12 12 1272
30 % 5345 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.