Sequence Similarity Clusters for the Entities in PDB 4GRG

Entity #1 | Chains: A,B
ANTI-IGE INHIBITOR E2_79 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46589
95 % 1 1 34939
90 % 1 1 33358
70 % 85 85 260
50 % 100 100 210
40 % 121 129 188
30 % 222 231 68
Entity #2 | Chains: C,D
Ig epsilon chain C region protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6672
95 % 16 16 896 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 16 16 932
70 % 16 16 962
50 % 16 16 992
40 % 16 16 1021
30 % 5693 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures