Sequence Similarity Clusters for the Entities in PDB 4GRG

Entity #1 | Chains: A,B
ANTI-IGE INHIBITOR E2_79 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43795
95 % 1 1 32931 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 31501
70 % 73 73 275
50 % 88 88 217
40 % 109 117 188
30 % 205 214 66
Entity #2 | Chains: C,D
Ig epsilon chain C region protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6216
95 % 12 12 1120 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 12 12 1145
70 % 12 12 1178
50 % 12 12 1227
40 % 12 12 1240
30 % 5148 5350 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.