Sequence Similarity Clusters for the Entities in PDB 4GQ9

Entity #1 | Chains: L
Chikungunya virus neutralizing antibody 9.8B Fab fragment light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 7150
95 % 8 10 3501
90 % 135 145 141
70 % 2134 2280 1
50 % 4328 4619 1
40 % 4328 4619 1
30 % 5123 5440 1
Entity #2 | Chains: H
Chikungunya virus neutralizing antibody 9.8B Fab fragment heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 7129
95 % 1 3 7695
90 % 1 3 7651
70 % 2098 2238 2
50 % 4329 4619 1
40 % 4329 4619 1
30 % 5124 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.