Sequence Similarity Clusters for the Entities in PDB 4GQ9

Entity #1 | Chains: L
Chikungunya virus neutralizing antibody 9.8B Fab fragment light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 6640
95 % 8 10 3311
90 % 133 141 137
70 % 1648 1729 2
50 % 4003 4220 1
40 % 4004 4221 1
30 % 4734 4972 1
Entity #2 | Chains: H
Chikungunya virus neutralizing antibody 9.8B Fab fragment heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 6622
95 % 1 3 7159
90 % 1 3 7129
70 % 1938 2041 1
50 % 4004 4220 1
40 % 4005 4221 1
30 % 4735 4972 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.