Sequence Similarity Clusters for the Entities in PDB 4GPT

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 40 512
95 % 23 63 303
90 % 24 66 312
70 % 25 69 322
50 % 25 69 352
40 % 26 70 373
30 % 330 710 14
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59155
95 % 11 20 2796
90 % 11 20 2841
70 % 11 20 2834
50 % 11 21 2489
40 % 11 21 2472
30 % 11 21 2311
Entity #3 | Chains: C
Exportin-1 protein, length: 1060 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27035
95 % 2 2 22411
90 % 2 2 21695
70 % 2 2 19860
50 % 2 13 2924
40 % 14 35 1236
30 % 14 35 1216

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.