Sequence Similarity Clusters for the Entities in PDB 4GPT

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 40 503
95 % 23 63 301
90 % 24 66 308
70 % 25 69 321
50 % 25 69 346
40 % 26 70 365
30 % 329 701 14
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58664
95 % 11 20 2772
90 % 11 20 2813
70 % 11 20 2808
50 % 11 21 2469
40 % 11 21 2453
30 % 11 21 2291
Entity #3 | Chains: C
Exportin-1 protein, length: 1060 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26801
95 % 2 2 22235
90 % 2 2 21528
70 % 2 2 19708
50 % 2 13 2898
40 % 14 35 1225
30 % 14 35 1203

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.