Sequence Similarity Clusters for the Entities in PDB 4GPT

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 39 483
95 % 23 61 304
90 % 24 64 313
70 % 25 67 324
50 % 25 67 347
40 % 26 68 373
30 % 326 693 14
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57926
95 % 11 19 2859
90 % 11 19 2901
70 % 11 19 2894
50 % 11 20 2538
40 % 11 20 2526
30 % 11 20 2367
Entity #3 | Chains: C
Exportin-1 protein, length: 1060 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26446
95 % 2 2 21959
90 % 2 2 21262
70 % 2 2 19467
50 % 2 13 2852
40 % 14 34 1246
30 % 14 34 1222

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.