Sequence Similarity Clusters for the Entities in PDB 4GPT

Entity #1 | Chains: A
GTP-binding nuclear protein Ran protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 40 565
95 % 23 63 310
90 % 24 66 320
70 % 25 69 333
50 % 25 69 375
40 % 26 70 398
30 % 336 719 15
Entity #2 | Chains: B
Ran-specific GTPase-activating protein 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60678
95 % 11 20 2922
90 % 11 20 2965
70 % 11 20 2942
50 % 11 21 2563
40 % 11 21 2544
30 % 11 21 2377
Entity #3 | Chains: C
Exportin-1 protein, length: 1060 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27820
95 % 2 2 23047
90 % 2 2 22316
70 % 2 2 20434
50 % 2 13 3021
40 % 14 35 1265
30 % 14 35 1245

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.