Sequence Similarity Clusters for the Entities in PDB 4GP4

Entity #1 | Chains: A
Cytochrome c oxidase subunit 1 protein, length: 568 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45490
95 % 11 35 1340
90 % 11 35 1362
70 % 11 35 1394
50 % 11 35 1439
40 % 11 35 1470
30 % 11 35 1443
Entity #2 | Chains: B
Cytochrome c oxidase subunit 2 protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 28 1330
95 % 11 35 1363
90 % 11 35 1383
70 % 11 35 1427
50 % 11 35 1470
40 % 11 35 1503
30 % 11 35 1466
Entity #3 | Chains: C
Cytochrome c oxidase polypeptide 2A protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 35 985
95 % 11 35 1376
90 % 11 35 1396
70 % 11 35 1442
50 % 11 35 1481
40 % 11 35 1514
30 % 11 35 1481

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.