Sequence Similarity Clusters for the Entities in PDB 4GOW

Entity #1 | Chains: D
Calmodulin protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 83 136 102
95 % 100 173 87 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 113 186 87
70 % 114 188 103
50 % 129 221 113
40 % 163 344 38
30 % 177 371 53
Entity #2 | Chains: A
Potassium voltage-gated channel subfamily KQT member 4 protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72904
95 % 1 1 50552
90 % 1 1 47940
70 % 1 1 42030
50 % 1 1 35839
40 % 1 1 31560
30 % 1 1 26630

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures