Sequence Similarity Clusters for the Entities in PDB 4GOW

Entity #1 | Chains: D
Calmodulin protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 80 132 101
95 % 97 169 93 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 110 182 85
70 % 111 184 100
50 % 126 217 114
40 % 160 340 39
30 % 174 367 51
Entity #2 | Chains: A
Potassium voltage-gated channel subfamily KQT member 4 protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71960
95 % 1 1 49946
90 % 1 1 47394
70 % 1 1 41576
50 % 1 1 35459
40 % 1 1 31237
30 % 1 1 26357

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.