Sequence Similarity Clusters for the Entities in PDB 4GOW

Entity #1 | Chains: D
Calmodulin protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 79 130 101
95 % 96 165 93 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 109 178 81
70 % 110 180 98
50 % 125 213 112
40 % 159 336 33
30 % 173 363 47
Entity #2 | Chains: A
Potassium voltage-gated channel subfamily KQT member 4 protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70017
95 % 1 1 48558
90 % 1 1 46123
70 % 1 1 40611
50 % 1 1 34722
40 % 1 1 30595
30 % 1 1 25806

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.