Sequence Similarity Clusters for the Entities in PDB 4GOW

Entity #1 | Chains: D
Calmodulin protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 106 186 60
95 % 107 190 80 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.7
PDBFlex
90 % 120 203 77
70 % 121 205 93
50 % 136 238 105
40 % 170 361 40
30 % 211 432 43
Entity #2 | Chains: A
Potassium voltage-gated channel subfamily KQT member 4 protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54012
95 % 1 1 44441
90 % 1 1 42278
70 % 1 1 37253
50 % 1 1 31618
40 % 1 1 27690
30 % 1 1 23110

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures