Sequence Similarity Clusters for the Entities in PDB 4GOW

Entity #1 | Chains: D
Calmodulin protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 90 149 96
95 % 107 186 82 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 120 199 81
70 % 121 201 96
50 % 136 234 106
40 % 170 357 41
30 % 184 384 50
Entity #2 | Chains: A
Potassium voltage-gated channel subfamily KQT member 4 protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74198
95 % 1 1 51394
90 % 1 1 48704
70 % 1 1 42677
50 % 1 1 36366
40 % 1 1 32024
30 % 1 1 27012

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures