Sequence Similarity Clusters for the Entities in PDB 4GOD

Entity #1 | Chains: A,B
Small glutamine-rich tetratricopeptide repeat-containing protein alpha protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 13924
95 % 2 3 13195 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.4
PDBFlex
90 % 2 3 12988
70 % 2 3 12185
50 % 2 3 10879
40 % 2 3 9875
30 % 2 3 8606

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.