Sequence Similarity Clusters for the Entities in PDB 4GOC

Entity #1 | Chains: A,B,C
Golgi to ER traffic protein 5 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 10273
95 % 2 5 10282 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 2 5 10156
70 % 2 5 9640
50 % 2 5 8714
40 % 2 5 7981
30 % 429 1062 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures