Sequence Similarity Clusters for the Entities in PDB 4GOC

Entity #1 | Chains: A,B,C
Golgi to ER traffic protein 5 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 9895
95 % 2 5 9962 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 2 5 9840
70 % 2 5 9350
50 % 2 5 8458
40 % 2 5 7750
30 % 417 1044 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures