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An Information Portal to 108124 Biological Macromolecular Structures

Crystal structure of Galphaq in complex with full-length human PLCbeta3
Sequence Clustering and Redundancy Reduction Results
4GNK
Sequence Clusters for the Sequence Entities in PDB 4GNK
Entity #1: Chains: A,C - Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 353 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 8932
95% 9 10 3815
90% 9 10 3844
70% 9 10 3827
50% 70 71 304
40% 87 89 288
30% 89 91 295
Entity #2: Chains: B,D - 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 1235 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 23623
95% 1 1 19694
90% 1 1 19094
70% 1 1 17584
50% 1 1 15431
40% 1 1 13829
30% 1 1 11927
Entity #3: Chains: E - 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 45988
95% 1 1 32722
90% 1 1 31430
70% 1 1 28223
50% 1 1 24312
40% 1 1 21551
30% 1 1 18342
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.