Sequence Similarity Clusters for the Entities in PDB 4GNK

Entity #1 | Chains: A,C
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 5898
95 % 10 11 3412
90 % 10 11 3452
70 % 10 11 3433
50 % 71 72 334
40 % 88 90 303
30 % 90 92 313
Entity #2 | Chains: B,D
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 1235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 26202
95 % 1 1 21774
90 % 1 1 21085
70 % 1 1 19299
50 % 1 1 16844
40 % 1 1 15054
30 % 1 1 12960
Entity #3 | Chains: E
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50492
95 % 1 1 35813
90 % 1 1 34320
70 % 1 1 30640
50 % 1 1 26284
40 % 1 1 23253
30 % 1 1 19725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.