Sequence Similarity Clusters for the Entities in PDB 4GNK

Entity #1 | Chains: A,C
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 6601
95 % 10 11 3772
90 % 10 11 3809
70 % 10 11 3758
50 % 74 77 395
40 % 91 95 335
30 % 93 97 331
Entity #2 | Chains: B,D
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 1235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 28772
95 % 1 1 23845
90 % 1 1 23081
70 % 1 1 21119
50 % 1 1 18376
40 % 1 1 16380
30 % 1 1 14077
Entity #3 | Chains: E
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55124
95 % 1 1 39036
90 % 1 1 37350
70 % 1 1 33267
50 % 1 1 28478
40 % 1 1 25134
30 % 1 1 21316

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.