Sequence Similarity Clusters for the Entities in PDB 4GNK

Entity #1 | Chains: A,C
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 6389
95 % 10 11 3691
90 % 10 11 3727
70 % 10 11 3676
50 % 74 77 354
40 % 91 95 326
30 % 93 97 318
Entity #2 | Chains: B,D
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 1235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 28008
95 % 1 1 23220
90 % 1 1 22481
70 % 1 1 20580
50 % 1 1 17915
40 % 1 1 15962
30 % 1 1 13706
Entity #3 | Chains: E
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53737
95 % 1 1 38031
90 % 1 1 36407
70 % 1 1 32460
50 % 1 1 27796
40 % 1 1 24533
30 % 1 1 20793

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.