Sequence Similarity Clusters for the Entities in PDB 4GNK

Entity #1 | Chains: A,C
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 6160
95 % 10 11 3543
90 % 10 11 3586
70 % 10 11 3553
50 % 73 76 340
40 % 90 94 314
30 % 92 96 310
Entity #2 | Chains: B,D
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 1235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 27229
95 % 1 1 22564
90 % 1 1 21847
70 % 1 1 19999
50 % 1 1 17426
40 % 1 1 15551
30 % 1 1 13361
Entity #3 | Chains: E
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52372
95 % 1 1 37098
90 % 1 1 35536
70 % 1 1 31713
50 % 1 1 27171
40 % 1 1 23994
30 % 1 1 20343

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.