Sequence Similarity Clusters for the Entities in PDB 4GNK

Entity #1 | Chains: A,C
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 6460
95 % 10 11 3721
90 % 10 11 3756
70 % 10 11 3705
50 % 74 77 383
40 % 91 95 327
30 % 93 97 322
Entity #2 | Chains: B,D
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 1235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 28372
95 % 1 1 23525
90 % 1 1 22779
70 % 1 1 20857
50 % 1 1 18151
40 % 1 1 16174
30 % 1 1 13909
Entity #3 | Chains: E
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54345
95 % 1 1 38497
90 % 1 1 36857
70 % 1 1 32842
50 % 1 1 28119
40 % 1 1 24817
30 % 1 1 21052

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.