Sequence Similarity Clusters for the Entities in PDB 4GNK

Entity #1 | Chains: A,C
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 6103
95 % 10 11 3515
90 % 10 11 3555
70 % 10 11 3524
50 % 73 76 336
40 % 90 94 313
30 % 92 96 308
Entity #2 | Chains: B,D
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 1235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 26990
95 % 1 1 22379
90 % 1 1 21664
70 % 1 1 19829
50 % 1 1 17288
40 % 1 1 15430
30 % 1 1 13259
Entity #3 | Chains: E
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51971
95 % 1 1 36837
90 % 1 1 35287
70 % 1 1 31487
50 % 1 1 26990
40 % 1 1 23837
30 % 1 1 20208

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.