Sequence Similarity Clusters for the Entities in PDB 4GNK

Entity #1 | Chains: A,C
Guanine nucleotide-binding protein G(q) subunit alpha protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 6907
95 % 10 11 3917
90 % 10 11 3955
70 % 10 11 3901
50 % 74 77 418
40 % 91 97 354
30 % 93 99 342
Entity #2 | Chains: B,D
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 1235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29949
95 % 1 1 24844
90 % 1 1 24034
70 % 1 1 21899
50 % 1 1 18987
40 % 1 1 16921
30 % 1 1 14535
Entity #3 | Chains: E
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57140
95 % 1 1 40510
90 % 1 1 38707
70 % 1 1 34371
50 % 1 1 29348
40 % 1 1 25894
30 % 1 1 21964

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.