Sequence Similarity Clusters for the Entities in PDB 4GKR

Entity #1 | Chains: A,B
Neck and C-terminal motor domain of Kar3 protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35034
95 % 1 1 27918 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 26950
70 % 6 6 8379
50 % 8 8 6201
40 % 78 136 218
30 % 86 152 212

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures