Sequence Similarity Clusters for the Entities in PDB 4GKR

Entity #1 | Chains: A,B
Neck and C-terminal motor domain of Kar3 protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34283
95 % 1 1 27366 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 26438
70 % 6 6 8236
50 % 8 8 6079
40 % 78 135 214
30 % 86 151 212

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.