Sequence Similarity Clusters for the Entities in PDB 4GKR

Entity #1 | Chains: A,B
Neck and C-terminal motor domain of Kar3 protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35561
95 % 1 1 28326 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 27342
70 % 6 6 8530
50 % 8 8 6302
40 % 78 136 224
30 % 86 152 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures