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Crystal structure of full-length human papillomavirus oncoprotein E6 in complex with LXXLL peptide of ubiquitin ligase E6AP at 2.55 A resolution
Sequence Clustering and Redundancy Reduction Results
4GIZ
Sequence Clusters for the Sequence Entities in PDB 4GIZ
Entity #1: Chains: A,B - Maltose-binding periplasmic protein, UBIQUITIN LIGASE EA6P: chimeric protein protein, length: 382 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 9188
95% 59 90 195
90% 61 104 157
70% 72 127 133
50% 72 127 161
40% 72 127 180
30% 85 143 170
Entity #2: Chains: C,D - Protein E6 protein, length: 142 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 36035
95% 1 1 27253
90% 1 1 26184
70% 1 1 23564
50% 1 1 20306
40% 1 1 17954
30% 1 1 15237
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.