POP-OUT | CLOSE

An Information Portal to 110071 Biological Macromolecular Structures

Crystal structure of full-length human papillomavirus oncoprotein E6 in complex with LXXLL peptide of ubiquitin ligase E6AP at 2.55 A resolution
Sequence Clustering and Redundancy Reduction Results
4GIZ
Sequence Clusters for the Sequence Entities in PDB 4GIZ
Entity #1: Chains: A,B - Maltose-binding periplasmic protein, UBIQUITIN LIGASE EA6P: chimeric protein protein, length: 382 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 9107
95% 59 90 193
90% 61 104 156
70% 72 127 131
50% 72 127 158
40% 72 127 177
30% 85 143 169
Entity #2: Chains: C,D - Protein E6 protein, length: 142 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 35760
95% 1 1 27048
90% 1 1 25999
70% 1 1 23407
50% 1 1 20175
40% 1 1 17838
30% 1 1 15146
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.