Sequence Similarity Clusters for the Entities in PDB 4GIZ

Entity #1 | Chains: A,B
Maltose-binding periplasmic protein, UBIQUITIN LIGASE EA6P: chimeric protein protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 8078
95 % 69 106 229 Flexibility: Low
Max RMSD: 8.8, Avg RMSD: 2.0
PDBFlex
90 % 76 126 156
70 % 103 173 97
50 % 103 173 134
40 % 103 173 149
30 % 117 190 152
Entity #2 | Chains: C,D
Protein E6 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44251
95 % 2 2 19369 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.2
PDBFlex
90 % 2 2 18857
70 % 2 2 17409
50 % 2 2 15131
40 % 2 2 13471
30 % 2 2 11528

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.