Sequence Similarity Clusters for the Entities in PDB 4GHI

Entity #1 | Chains: A
Endothelial PAS domain-containing protein 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 5826
95 % 3 11 5322
90 % 3 11 5327
70 % 3 12 4505
50 % 4 13 3787
40 % 4 13 3628
30 % 6 31 1339
Entity #2 | Chains: B
Aryl hydrocarbon receptor nuclear translocator protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 5024
95 % 3 17 2460
90 % 3 17 2502
70 % 3 17 2487
50 % 3 17 2483
40 % 3 17 2468
30 % 7 31 1339

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.