Sequence Similarity Clusters for the Entities in PDB 4GHI

Entity #1 | Chains: A
Endothelial PAS domain-containing protein 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 5892
95 % 3 13 4302
90 % 3 13 4315
70 % 3 14 3918
50 % 4 15 3319
40 % 4 15 3205
30 % 6 34 1248
Entity #2 | Chains: B
Aryl hydrocarbon receptor nuclear translocator protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 5088
95 % 3 18 2336
90 % 3 18 2380
70 % 3 18 2380
50 % 3 18 2376
40 % 3 18 2369
30 % 7 34 1248

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.