Sequence Similarity Clusters for the Entities in PDB 4GHI

Entity #1 | Chains: A
Endothelial PAS domain-containing protein 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 5677
95 % 3 11 5194
90 % 3 11 5202
70 % 3 12 4397
50 % 4 13 3686
40 % 4 13 3540
30 % 6 31 1309
Entity #2 | Chains: B
Aryl hydrocarbon receptor nuclear translocator protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 4897
95 % 3 17 2385
90 % 3 17 2427
70 % 3 17 2424
50 % 3 17 2421
40 % 3 17 2410
30 % 7 31 1309

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.