Sequence Similarity Clusters for the Entities in PDB 4GH9

Entity #1 | Chains: A
Polymerase cofactor VP35 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16955
95 % 1 2 15243 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 2 14937
70 % 1 2 13980
50 % 1 5 4336
40 % 1 5 4098
30 % 1 5 3768

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4GH9 1 A Polymerase cofactor VP35 UNP residues 204-329 11269
2 3KS4 1 A, B Polymerase cofactor VP35 C-terminal RNA binding domain (UNP residues 160-329) 186539
3 3KS8 3 A, B, C, D Polymerase cofactor VP35 C-terminal RNA binding domain (UNP residues 160-329) 186539
4 4GHA 1 A, C, E, G Polymerase cofactor VP35 Marburg virus VP35 RNA binding domain, UNP residues 204-329 11269
5 4LG2 1 A, B, C, D Polymerase cofactor UNP residues 205-329 186539