Sequence Similarity Clusters for the Entities in PDB 4GF3

Entity #1 | Chains: A
Putative yopH targeting protein protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37645
95 % 1 2 31960 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 30619
70 % 1 2 27429
50 % 1 2 23505
40 % 1 2 20697
30 % 1 2 17271
Entity #2 | Chains: B
Tyrosine-protein phosphatase yopH protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57799
95 % 1 1 47309
90 % 1 1 44950
70 % 1 1 39514
50 % 1 1 33529
40 % 1 1 29384
30 % 1 1 24532

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4GF3 2 B Tyrosine-protein phosphatase yopH 630 3.1.3.48 | Details