Sequence Similarity Clusters for the Entities in PDB 4GF3

Entity #1 | Chains: A
Putative yopH targeting protein protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39147
95 % 1 2 33202 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 31759
70 % 1 2 28337
50 % 1 2 24247
40 % 1 2 21350
30 % 1 2 17838
Entity #2 | Chains: B
Tyrosine-protein phosphatase yopH protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59795
95 % 1 1 48896
90 % 1 1 46403
70 % 1 1 40720
50 % 1 1 34562
40 % 1 1 30265
30 % 1 1 25282

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4GF3 1 A Putative yopH targeting protein 632
2 1TTW 1 A secretion chaperone 632