Sequence Similarity Clusters for the Entities in PDB 4GF3

Entity #1 | Chains: A
Putative yopH targeting protein protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40093
95 % 1 2 33944 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 32443
70 % 1 2 28907
50 % 1 2 24745
40 % 1 2 21786
30 % 1 2 18180
Entity #2 | Chains: B
Tyrosine-protein phosphatase yopH protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61149
95 % 1 1 49938
90 % 1 1 47352
70 % 1 1 41506
50 % 1 1 35219
40 % 1 1 30851
30 % 1 1 25742

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4GF3 1 A Putative yopH targeting protein 632
2 1TTW 1 A secretion chaperone 632