Sequence Similarity Clusters for the Entities in PDB 4GF3

Entity #1 | Chains: A
Putative yopH targeting protein protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39577
95 % 1 2 33531 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 32065
70 % 1 2 28585
50 % 1 2 24472
40 % 1 2 21551
30 % 1 2 17999
Entity #2 | Chains: B
Tyrosine-protein phosphatase yopH protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60371
95 % 1 1 49353
90 % 1 1 46796
70 % 1 1 41044
50 % 1 1 34835
40 % 1 1 30512
30 % 1 1 25504

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures