Sequence Similarity Clusters for the Entities in PDB 4GF3

Entity #1 | Chains: A
Putative yopH targeting protein protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38725
95 % 1 2 32833 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 31412
70 % 1 2 28054
50 % 1 2 24009
40 % 1 2 21136
30 % 1 2 17646
Entity #2 | Chains: B
Tyrosine-protein phosphatase yopH protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59212
95 % 1 1 48397
90 % 1 1 45924
70 % 1 1 40309
50 % 1 1 34182
40 % 1 1 29921
30 % 1 1 24995

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures