Sequence Similarity Clusters for the Entities in PDB 4GEQ

Entity #1 | Chains: A,C
Kinetochore protein SPC25 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 21356
95 % 2 3 18274
90 % 2 3 17780
70 % 2 3 16434
50 % 2 3 14350
40 % 2 3 12827
30 % 2 3 11003
Entity #2 | Chains: B,D
Kinetochore protein SPC24 protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43450
95 % 1 1 32468
90 % 1 1 31092
70 % 1 1 27843
50 % 1 1 23924
40 % 1 1 21135
30 % 1 1 17924
Entity #3 | Chains: E,F
Kinetochore-associated protein CNN1 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44338
95 % 1 1 33200
90 % 1 1 31794
70 % 1 1 28496
50 % 1 1 24517
40 % 1 1 21716
30 % 1 1 18495

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.