Sequence Similarity Clusters for the Entities in PDB 4GEQ

Entity #1 | Chains: A,C
Kinetochore protein SPC25 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 14542
95 % 3 4 13668
90 % 3 4 13415
70 % 3 4 12593
50 % 3 4 11259
40 % 3 4 10222
30 % 3 4 8882
Entity #2 | Chains: B,D
Kinetochore protein SPC24 protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44482
95 % 1 1 33217
90 % 1 1 31801
70 % 1 1 28444
50 % 1 1 24423
40 % 1 1 21564
30 % 1 1 18277
Entity #3 | Chains: E,F
Kinetochore-associated protein CNN1 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45388
95 % 1 1 33963
90 % 1 1 32515
70 % 1 1 29109
50 % 1 1 25027
40 % 1 1 22156
30 % 1 1 18858

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.