Sequence Similarity Clusters for the Entities in PDB 4GEQ

Entity #1 | Chains: A,C
Kinetochore protein SPC25 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 21557
95 % 2 3 18429
90 % 2 3 17931
70 % 2 3 16565
50 % 2 3 14458
40 % 2 3 12915
30 % 2 3 11081
Entity #2 | Chains: B,D
Kinetochore protein SPC24 protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43834
95 % 1 1 32742
90 % 1 1 31352
70 % 1 1 28072
50 % 1 1 24105
40 % 1 1 21289
30 % 1 1 18051
Entity #3 | Chains: E,F
Kinetochore-associated protein CNN1 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44732
95 % 1 1 33481
90 % 1 1 32061
70 % 1 1 28732
50 % 1 1 24705
40 % 1 1 21877
30 % 1 1 18628

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.