Sequence Similarity Clusters for the Entities in PDB 4GEQ

Entity #1 | Chains: A,C
Kinetochore protein SPC25 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 20698
95 % 2 3 17753
90 % 2 3 17279
70 % 2 3 15958
50 % 2 3 13954
40 % 2 3 12493
30 % 2 3 10741
Entity #2 | Chains: B,D
Kinetochore protein SPC24 protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42175
95 % 1 1 31561
90 % 1 1 30239
70 % 1 1 27065
50 % 1 1 23277
40 % 1 1 20603
30 % 1 1 17481
Entity #3 | Chains: E,F
Kinetochore-associated protein CNN1 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43039
95 % 1 1 32269
90 % 1 1 30916
70 % 1 1 27697
50 % 1 1 23850
40 % 1 1 21165
30 % 1 1 18033

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.