Sequence Similarity Clusters for the Entities in PDB 4GEQ

Entity #1 | Chains: A,C
Kinetochore protein SPC25 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 14859
95 % 3 4 13947
90 % 3 4 13693
70 % 3 4 12831
50 % 3 4 11473
40 % 3 4 10405
30 % 3 4 9036
Entity #2 | Chains: B,D
Kinetochore protein SPC24 protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45474
95 % 1 1 33972
90 % 1 1 32525
70 % 1 1 29069
50 % 1 1 24944
40 % 1 1 22021
30 % 1 1 18682
Entity #3 | Chains: E,F
Kinetochore-associated protein CNN1 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46392
95 % 1 1 34727
90 % 1 1 33243
70 % 1 1 29740
50 % 1 1 25552
40 % 1 1 22616
30 % 1 1 19266

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.