Sequence Similarity Clusters for the Entities in PDB 4GEQ

Entity #1 | Chains: A,C
Kinetochore protein SPC25 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 15743
95 % 3 4 14771
90 % 3 4 14493
70 % 3 4 13583
50 % 3 4 12071
40 % 3 4 10949
30 % 3 4 9499
Entity #2 | Chains: B,D
Kinetochore protein SPC24 protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47873
95 % 1 1 35774
90 % 1 1 34184
70 % 1 1 30439
50 % 1 1 26052
40 % 1 1 22991
30 % 1 1 19499
Entity #3 | Chains: E,F
Kinetochore-associated protein CNN1 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48844
95 % 1 1 36569
90 % 1 1 34935
70 % 1 1 31129
50 % 1 1 26676
40 % 1 1 23602
30 % 1 1 20098

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.