Sequence Similarity Clusters for the Entities in PDB 4GEK

Entity #1 | Chains: A,G
tRNA (cmo5U34)-methyltransferase protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34899
95 % 1 1 29980 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 28758
70 % 1 3 11474
50 % 1 3 10252
40 % 1 3 9250
30 % 1 3 7955

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures