Sequence Similarity Clusters for the Entities in PDB 4GEK

Entity #1 | Chains: A,G
tRNA (cmo5U34)-methyltransferase protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38111
95 % 1 1 29557 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 28529
70 % 1 3 11304
50 % 1 3 10120
40 % 1 3 9196
30 % 1 3 8031

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.