Sequence Similarity Clusters for the Entities in PDB 4GEJ

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
Thioredoxin-interacting protein protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6414
95 % 3 3 5744 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.8
PDBFlex
90 % 3 3 5764
70 % 3 3 5630
50 % 3 3 5321
40 % 4 4 4631
30 % 4 4 4167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures