Sequence Similarity Clusters for the Entities in PDB 4GE8

Entity #1 | Chains: A
NADPH dehydrogenase 1 protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 7352
95 % 8 22 3081 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 8 22 3139
70 % 8 24 2553
50 % 8 26 1881
40 % 33 111 424
30 % 46 148 271

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1VYR 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4,6 TRINITROPHENOL IS BOUND IN THE ACTIVE SITE RESIDUES 2-365 550
2 4AWT 1 A SYE1 N-TERMINAL T2 IS INVOLVED IN AN N, O FIVE RING ACETAL BY REACTION WITH HO-CH2-CH2-O-CH2-CHO, A PEG400 BREAKDOWN PRODUCT. 70863 1.6.99.1 | Details
3 4AWS 1 A SYE1 N-TERMINAL T2 IS INVOLVED IN AN N, O FIVE RING ACETAL BY REACTION WITH HO-CH2-CH2-O-CH2-CHO, A PEG400 BREAKDOWN PRODUCT. 70863 1.6.99.1 | Details
4 3P8J 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
5 2ABB 1 A pentaerythritol tetranitrate reductase 550 1.7.99 | Details
6 2ABA 1 A pentaerythritol tetranitrate reductase 550 1.7.99 | Details
7 3P84 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
8 4B5N 1 A OXIDOREDUCTASE, FMN-BINDING 70863 1.6.99.1 | Details
9 4GBU 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
10 4K7Y 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
11 3P81 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
12 3P8I 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
13 3P7Y 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
14 3P80 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
15 3P74 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
16 4K8E 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
17 4H4I 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
18 1VYP 1 X PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4,6 TRINITROPHENOL IS BOUND IN THE ACTIVE SITE 550
19 5K1K 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details 1.6.99.1 | Details
20 4E2B 1 A Old Yellow Enzyme 5693
21 3F03 1 K Pentaerythritol tetranitrate reductase 550 1.7.99 | Details
22 4GXM 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
23 3P62 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
24 4GWE 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
25 3RND 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
26 5DXX 1 A Artemisinic aldehyde Delta(11(13)) reductase 35608 1.3.1.92 | Details
27 2R14 1 A Morphinone reductase 303
28 1GVR 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4,6 TRINITROTOLUENE IS BOUND IN THE ACTIVE SITE 550
29 1GVS 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4,6 TRINITROPHENOL IS BOUND IN THE ACTIVE SITE 550
30 1GVO 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4 DINITROPHENOL IS BOUND IN THE ACTIVE SITE 550
31 2GOU 1 A oxidoreductase, FMN-binding 70863
32 5K0R 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details
33 4GE8 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
34 5K1M 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details
35 4M5P 1 A NADPH dehydrogenase 4924
36 3TJL 1 A NADPH dehydrogenase 4924 1.6.99.1 | Details
37 3P67 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
38 4YIL 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
39 5LGZ 1 A Pentaerythritol tetranitrate reductase 550
40 4K8H 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
41 1H61 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE NON-COVALENTLY BOUND FLAVIN MONONUCLEOTIDE 550
42 5K1U 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details
43 4YNC 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
44 4K7V 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
45 5LGX 1 A Pentaerythritol tetranitrate reductase 550
46 5K1Q 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details
47 4AB4 1 A, B XENOBIOTIC REDUCTASE B 303
48 5N6G 1 A GTN Reductase 358
49 5K1W 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details
50 5DY2 1 A Artemisinic aldehyde Delta(11(13)) reductase 35608 1.3.1.92 | Details
51 1H50 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE ACETATE IS BOUND IN THE ACTIVE SITE 550
52 4JIC 1 A, B, C GTN Reductase 358
53 4H6K 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
54 1H60 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE NON-COVALENTLY BOUND FLAVIN MONONUCLEOTIDE 550
55 2HSA 1 A, B 12-oxophytodienoate reductase 3 4081 1.3.1.42 | Details
56 1H51 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE THIOCYANATE IS BOUND IN THE ACTIVE SITE 550
57 1H63 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE NON-COVALENTLY BOUND FLAVIN MONONUCLEOTIDE 550
58 3TXZ 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
59 4AWU 1 A OXIDOREDUCTASE, FMN-BINDING 70863 1.6.99.1 | Details
60 3ATY 1 A, B Prostaglandin F2a synthase 5693
61 2GQ8 1 A oxidoreductase, FMN-binding 70863
62 4AEO 1 A, B XENOBIOTIC REDUCTASE B 303
63 1VYS 1 X PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4,6 TRINITROPHENOL IS BOUND IN THE ACTIVE SITE 550
64 2GQA 1 A oxidoreductase, FMN-binding 70863
65 5DXY 1 A Artemisinic aldehyde Delta(11(13)) reductase 35608 1.3.1.92 | Details
66 5V4V 1 A, B NADPH dehydrogenase 3 4932 1.6.99.1 | Details
67 3UPW 1 A Old Yellow Enzyme 2.6 (OYE2.6), NADPH dehydrogenase 4924 1.6.99.1 | Details
68 5DY3 1 A Artemisinic aldehyde Delta(11(13)) reductase 35608 1.3.1.92 | Details
69 2GQ9 1 A oxidoreductase, FMN-binding 70863
70 4TMC 1 A, B, C, D Old yellow enzyme 4911
71 4OT7 1 A NADH:flavin oxidoreductase/NADH oxidase UNP residues 1-227, 241-358 542
72 4TMB 1 A, B, C, D Old yellow enzyme 4911
73 4QNW 1 A Chanoclavine-I aldehyde reductase EasA 746128 1.3.1.100 | Details
74 5V4P 1 A, B NADPH dehydrogenase 3 4932 1.6.99.1 | Details
75 4A3U 1 A, B NADH\:FLAVIN OXIDOREDUCTASE/NADH OXIDASE 542
76 1ICP 1 A, B 12-OXOPHYTODIENOATE REDUCTASE 1 4081 1.3.1.42 | Details
77 1H62 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE NON-COVALENTLY BOUND FLAVIN MONONUCLEOTIDE 550
78 4DF2 1 A NADPH dehydrogenase 4924
79 1OYC 1 A OLD YELLOW ENZYME 27292 1.6.99.1 | Details
80 1OYB 1 A OLD YELLOW ENZYME 27292 1.6.99.1 | Details
81 2HS6 1 A, B 12-oxophytodienoate reductase 3 4081 1.3.1.42 | Details
82 2Q3O 1 A, B 12-oxophytodienoate reductase 3 3702 1.3.1.42 | Details
83 1OYA 1 A OLD YELLOW ENZYME 27292 1.6.99.1 | Details
84 3ATZ 1 A, B, C, D Prostaglandin F2a synthase 5693
85 3TX9 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
86 1Q45 1 A, B 12-oxophytodienoate-10,11-reductase 3702 1.3.1.42 | Details
87 3KFT 1 A, B Pentaerythritol tetranitrate reductase 550
88 3P82 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
89 2Q3R 1 A 12-oxophytodienoate reductase 1 3702 1.3.1.42 | Details
90 4E2D 1 A, B, C, D Old Yellow Protein 5693
91 1ICQ 1 A, B 12-OXOPHYTODIENOATE REDUCTASE 1 4081 1.3.1.42 | Details
92 2HS8 1 A, B 12-oxophytodienoate reductase 3 4081 1.3.1.42 | Details
93 1VJI 1 A 12-oxophytodienoate reductase (OPR1) 3702 1.3.1.42 | Details
94 1GVQ 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE 2-CYCLOHEXENONE IS BOUND IN THE ACTIVE SITE 550
95 3HGS 1 A, B 12-oxophytodienoate reductase 3 4081 1.3.1.42 | Details
96 5EPD 1 A Glycerol trinitrate reductase C-terminal pentapeptide region tightly interact with the crystal symmetry mate. FMN site is not occupied. 358
97 3GKA 1 A, B N-ethylmaleimide reductase 28450
98 1BWK 1 A PROTEIN (NADPH DEHYDROGENASE 1) 5476 1.6.99.1 | Details
99 3GX9 1 A Morphinone reductase 303
100 1GWJ 1 A MORPHINONE REDUCTASE 303
101 1K03 1 A NADPH DEHYDROGENASE 1 4932 1.6.99.1 | Details
102 4JIP 1 A GTN Reductase 358
103 1ICS 1 A, B 12-OXOPHYTODIENOATE REDUCTASE 1 4081 1.3.1.42 | Details
104 1K02 1 A NADPH DEHYDROGENASE 1 4932 1.6.99.1 | Details
105 3HGR 1 A, B 12-oxophytodienoate reductase 1 4081 1.3.1.42 | Details
106 3HGO 1 A, B 12-oxophytodienoate reductase 3 4081 1.3.1.42 | Details
107 4JIQ 1 A GTN Reductase 358
108 2G5W 1 A, B 12-oxophytodienoate reductase 3 3702 1.3.1.42 | Details
109 1BWL 1 A PROTEIN (NADPH DEHYDROGENASE 1) 5476 1.6.99.1 | Details
110 4QAI 1 A, B, C, D, E, F NADPH dehydrogenase 4924
111 3WJS 1 A NADH oxidase 442