Sequence Similarity Clusters for the Entities in PDB 4GE8

Entity #1 | Chains: A
NADPH dehydrogenase 1 protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 7352
95 % 8 22 3081 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 8 22 3139
70 % 8 24 2553
50 % 8 26 1881
40 % 33 111 424
30 % 46 148 271

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1VYR 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4,6 TRINITROPHENOL IS BOUND IN THE ACTIVE SITE RESIDUES 2-365 550
2 4AWT 1 A SYE1 N-TERMINAL T2 IS INVOLVED IN AN N, O FIVE RING ACETAL BY REACTION WITH HO-CH2-CH2-O-CH2-CHO, A PEG400 BREAKDOWN PRODUCT. 70863 1.6.99.1 | Details
3 4AWS 1 A SYE1 N-TERMINAL T2 IS INVOLVED IN AN N, O FIVE RING ACETAL BY REACTION WITH HO-CH2-CH2-O-CH2-CHO, A PEG400 BREAKDOWN PRODUCT. 70863 1.6.99.1 | Details
4 3P8J 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
5 2ABB 1 A pentaerythritol tetranitrate reductase 550 1.7.99 | Details
6 3L5L 1 A Xenobiotic reductase A 303 1.6.99.1 | Details
7 2ABA 1 A pentaerythritol tetranitrate reductase 550 1.7.99 | Details
8 4UTJ 1 A NADH:flavin oxidoreductase 303
9 4UTM 1 A XENOBIOTIC REDUCTASE 303 1.6.99.1 | Details
10 4UTI 1 A NADH:flavin oxidoreductase 303
11 3P84 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
12 4B5N 1 A OXIDOREDUCTASE, FMN-BINDING 70863 1.6.99.1 | Details
13 5LNI 1 A NADH:flavin oxidoreductase 303
14 4GBU 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
15 5LNJ 1 A NADH:flavin oxidoreductase 303
16 3L5M 1 A Xenobiotic reductase A 303 1.6.99.1 | Details
17 4K7Y 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
18 3P81 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
19 3P8I 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
20 3P7Y 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
21 3L65 1 A Xenobiotic reductase A 303 1.6.99.1 | Details
22 3P80 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
23 3P74 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
24 4UTL 1 A XENOBIOTIC REDUCTASE 303 1.6.99.1 | Details
25 4K8E 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
26 4H4I 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
27 4UTH 1 A NADH:flavin oxidoreductase 303
28 1VYP 1 X PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4,6 TRINITROPHENOL IS BOUND IN THE ACTIVE SITE 550
29 3L66 1 A Xenobiotic reductase A 303 1.6.99.1 | Details
30 5K1K 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details 1.6.99.1 | Details
31 4E2B 1 A Old Yellow Enzyme 5693
32 3F03 1 K Pentaerythritol tetranitrate reductase 550 1.7.99 | Details
33 4GXM 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
34 3P62 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
35 1Z41 1 A, B Probable NADH-dependent flavin oxidoreductase yqjM 1423 1.6.99.1 | Details
36 4GWE 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
37 3RND 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
38 5DXX 1 A Artemisinic aldehyde Delta(11(13)) reductase 35608 1.3.1.92 | Details
39 2R14 1 A Morphinone reductase 303
40 1GVR 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4,6 TRINITROTOLUENE IS BOUND IN THE ACTIVE SITE 550
41 1GVS 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4,6 TRINITROPHENOL IS BOUND IN THE ACTIVE SITE 550
42 1GVO 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4 DINITROPHENOL IS BOUND IN THE ACTIVE SITE 550
43 4UTK 1 A XENOBIOTIC REDUCTASE 303 1.6.99.1 | Details
44 2GOU 1 A oxidoreductase, FMN-binding 70863
45 5K0R 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details
46 4GE8 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
47 5K1M 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details
48 4M5P 1 A NADPH dehydrogenase 4924
49 3TJL 1 A NADPH dehydrogenase 4924 1.6.99.1 | Details
50 3P67 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
51 4YIL 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
52 5LGZ 1 A Pentaerythritol tetranitrate reductase 550
53 1Z44 1 A, B Probable NADH-dependent flavin oxidoreductase yqjM 1423 1.6.99.1 | Details
54 4K8H 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
55 1H61 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE NON-COVALENTLY BOUND FLAVIN MONONUCLEOTIDE 550
56 5K1U 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details
57 2H8Z 1 A Xenobiotic reductase A 303
58 4YNC 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
59 4K7V 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
60 5CPM 1 A, B Xenobiotic reductase 303
61 2H90 1 A Xenobiotic reductase A 303
62 5LGX 1 A Pentaerythritol tetranitrate reductase 550
63 5K1Q 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details
64 4AB4 1 A, B XENOBIOTIC REDUCTASE B 303
65 5CPL 1 A, B Xenobiotic reductase 303
66 5N6G 1 A GTN Reductase 358
67 5K1W 1 A NAD(P)H:flavin oxidoreductase Sye4 70863 1.5.1.30 | Details
68 2H8X 1 A Xenobiotic reductase A 303
69 5DY2 1 A Artemisinic aldehyde Delta(11(13)) reductase 35608 1.3.1.92 | Details
70 1H50 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE ACETATE IS BOUND IN THE ACTIVE SITE 550
71 3KRU 1 A, B, C, D NADH:flavin oxidoreductase/NADH oxidase 496866 1.6.99.1 | Details
72 4JIC 1 A, B, C GTN Reductase 358
73 4H6K 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
74 1H60 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE NON-COVALENTLY BOUND FLAVIN MONONUCLEOTIDE 550
75 5CPO 1 A, B Xenobiotic reductase 303
76 2HSA 1 A, B 12-oxophytodienoate reductase 3 4081 1.3.1.42 | Details
77 1H51 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE THIOCYANATE IS BOUND IN THE ACTIVE SITE 550
78 1H63 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE NON-COVALENTLY BOUND FLAVIN MONONUCLEOTIDE 550
79 3TXZ 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
80 4AWU 1 A OXIDOREDUCTASE, FMN-BINDING 70863 1.6.99.1 | Details
81 3ATY 1 A, B Prostaglandin F2a synthase 5693
82 5OCS 1 A, B, C, D Putative NADH-depentdent flavin oxidoreductase 119219 1.6.99.1 | Details
83 2GQ8 1 A oxidoreductase, FMN-binding 70863
84 4AEO 1 A, B XENOBIOTIC REDUCTASE B 303
85 1VYS 1 X PENTAERYTHRITOL TETRANITRATE REDUCTASE 2,4,6 TRINITROPHENOL IS BOUND IN THE ACTIVE SITE 550
86 2GQA 1 A oxidoreductase, FMN-binding 70863
87 5DXY 1 A Artemisinic aldehyde Delta(11(13)) reductase 35608 1.3.1.92 | Details
88 5V4V 1 A, B NADPH dehydrogenase 3 4932 1.6.99.1 | Details
89 3UPW 1 A Old Yellow Enzyme 2.6 (OYE2.6), NADPH dehydrogenase 4924 1.6.99.1 | Details
90 3KRZ 1 A, B, C, D NADH:flavin oxidoreductase/NADH oxidase 496866
91 5DY3 1 A Artemisinic aldehyde Delta(11(13)) reductase 35608 1.3.1.92 | Details
92 2GQ9 1 A oxidoreductase, FMN-binding 70863
93 3L68 1 A Xenobiotic reductase A 303 1.6.99.1 | Details
94 4TMC 1 A, B, C, D Old yellow enzyme 4911
95 4OT7 1 A NADH:flavin oxidoreductase/NADH oxidase UNP residues 1-227, 241-358 542
96 4TMB 1 A, B, C, D Old yellow enzyme 4911
97 1Z48 1 A, B Probable NADH-dependent flavin oxidoreductase yqjM 1423 1.6.99.1 | Details
98 4QNW 1 A Chanoclavine-I aldehyde reductase EasA 746128 1.3.1.100 | Details
99 5CPN 1 A, B Xenobiotic reductase 303
100 3L67 1 A Xenobiotic reductase A 303 1.6.99.1 | Details
101 3N19 1 B, D Xenobiotic reductase A 303 1.6.99.1 | Details
102 1Z42 1 A, B Probable NADH-dependent flavin oxidoreductase yqjM 1423 1.6.99.1 | Details
103 5V4P 1 A, B NADPH dehydrogenase 3 4932 1.6.99.1 | Details
104 4A3U 1 A, B NADH\:FLAVIN OXIDOREDUCTASE/NADH OXIDASE 542
105 1ICP 1 A, B 12-OXOPHYTODIENOATE REDUCTASE 1 4081 1.3.1.42 | Details
106 3N14 1 A Xenobiotic reductase A 303 1.6.99.1 | Details
107 1H62 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE NON-COVALENTLY BOUND FLAVIN MONONUCLEOTIDE 550
108 4DF2 1 A NADPH dehydrogenase 4924
109 1OYC 1 A OLD YELLOW ENZYME 27292 1.6.99.1 | Details
110 1OYB 1 A OLD YELLOW ENZYME 27292 1.6.99.1 | Details
111 2HS6 1 A, B 12-oxophytodienoate reductase 3 4081 1.3.1.42 | Details
112 2Q3O 1 A, B 12-oxophytodienoate reductase 3 3702 1.3.1.42 | Details
113 1OYA 1 A OLD YELLOW ENZYME 27292 1.6.99.1 | Details
114 3ATZ 1 A, B, C, D Prostaglandin F2a synthase 5693
115 3TX9 1 A NADPH dehydrogenase 1 27292 1.6.99.1 | Details
116 1Q45 1 A, B 12-oxophytodienoate-10,11-reductase 3702 1.3.1.42 | Details
117 3KFT 1 A, B Pentaerythritol tetranitrate reductase 550
118 3P82 1 A Pentaerythritol tetranitrate reductase 550 1.6.99.1 | Details
119 2Q3R 1 A 12-oxophytodienoate reductase 1 3702 1.3.1.42 | Details
120 4E2D 1 A, B, C, D Old Yellow Protein 5693
121 1ICQ 1 A, B 12-OXOPHYTODIENOATE REDUCTASE 1 4081 1.3.1.42 | Details
122 2HS8 1 A, B 12-oxophytodienoate reductase 3 4081 1.3.1.42 | Details
123 3HGJ 1 A, B, C, D Chromate reductase 37636 1.6.99.1 | Details
124 1VJI 1 A 12-oxophytodienoate reductase (OPR1) 3702 1.3.1.42 | Details
125 1GVQ 1 A PENTAERYTHRITOL TETRANITRATE REDUCTASE 2-CYCLOHEXENONE IS BOUND IN THE ACTIVE SITE 550
126 3HGS 1 A, B 12-oxophytodienoate reductase 3 4081 1.3.1.42 | Details
127 5N6Q 1 A, B NADH:flavin oxidoreductase 303
128 3HF3 1 A, B, C, D Chromate reductase 37636 1.6.99.1 | Details
129 5EPD 1 A Glycerol trinitrate reductase C-terminal pentapeptide region tightly interact with the crystal symmetry mate. FMN site is not occupied. 358
130 3GKA 1 A, B N-ethylmaleimide reductase 28450
131 1BWK 1 A PROTEIN (NADPH DEHYDROGENASE 1) 5476 1.6.99.1 | Details
132 3GX9 1 A Morphinone reductase 303
133 5NUX 1 A, B, C, D Chromate reductase 37636
134 1GWJ 1 A MORPHINONE REDUCTASE 303
135 1K03 1 A NADPH DEHYDROGENASE 1 4932 1.6.99.1 | Details
136 4JIP 1 A GTN Reductase 358
137 1ICS 1 A, B 12-OXOPHYTODIENOATE REDUCTASE 1 4081 1.3.1.42 | Details
138 3GR7 1 A, B NADPH dehydrogenase 1462 1.6.99.1 | Details
139 5OGT 1 A, B, C, D Chromate reductase 37636
140 1K02 1 A NADPH DEHYDROGENASE 1 4932 1.6.99.1 | Details
141 3HGR 1 A, B 12-oxophytodienoate reductase 1 4081 1.3.1.42 | Details
142 3HGO 1 A, B 12-oxophytodienoate reductase 3 4081 1.3.1.42 | Details
143 3GR8 1 A, B NADPH dehydrogenase 1462 1.6.99.1 | Details
144 4JIQ 1 A GTN Reductase 358
145 2G5W 1 A, B 12-oxophytodienoate reductase 3 3702 1.3.1.42 | Details
146 1BWL 1 A PROTEIN (NADPH DEHYDROGENASE 1) 5476 1.6.99.1 | Details
147 4QAI 1 A, B, C, D, E, F NADPH dehydrogenase 4924
148 3WJS 1 A NADH oxidase 442