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Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1
Sequence Clustering and Redundancy Reduction Results
4GDL
Sequence Clusters for the Sequence Entities in PDB 4GDL
Entity #1: Chains: A - Ubiquitin-like protein ATG12 protein, length: 91 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 8354
95% 3 3 8478
90% 3 3 8395
70% 3 3 8019
50% 3 3 7321
40% 4 4 5319
30% 5 5 4428
Entity #2: Chains: B - Autophagy protein 5 protein, length: 275 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 4333
95% 5 5 4951
90% 5 5 4960
70% 5 5 4875
50% 5 5 4608
40% 5 5 4322
30% 5 5 3916
Entity #3: Chains: C - Autophagy-related protein 16-1 protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 8403
95% 3 3 8534
90% 3 3 8451
70% 3 3 8076
50% 3 3 7374
40% 3 3 6804
30% 3 3 6058
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.