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Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1
Sequence Clustering and Redundancy Reduction Results
4GDL
Sequence Clusters for the Sequence Entities in PDB 4GDL
Entity #1: Chains: A - Ubiquitin-like protein ATG12 protein, length: 91 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 8295
95% 3 3 8434
90% 3 3 8355
70% 3 3 7982
50% 3 3 7291
40% 4 4 5292
30% 5 5 4407
Entity #2: Chains: B - Autophagy protein 5 protein, length: 275 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 4300
95% 5 5 4900
90% 5 5 4909
70% 5 5 4833
50% 5 5 4582
40% 5 5 4303
30% 5 5 3894
Entity #3: Chains: C - Autophagy-related protein 16-1 protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 8343
95% 3 3 8489
90% 3 3 8410
70% 3 3 8039
50% 3 3 7344
40% 3 3 6777
30% 3 3 6035
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.