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Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1
Sequence Clustering and Redundancy Reduction Results
4GDL
Sequence Clusters for the Sequence Entities in PDB 4GDL
Entity #1: Chains: A - Ubiquitin-like protein ATG12 protein, length: 91 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 8002
95% 3 3 8201
90% 3 3 8124
70% 3 3 7770
50% 3 3 7113
40% 4 4 5152
30% 5 5 4316
Entity #2: Chains: B - Autophagy protein 5 protein, length: 275 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 7655
95% 3 3 7878
90% 3 3 7801
70% 3 3 7480
50% 3 3 6853
40% 3 3 6315
30% 3 3 5639
Entity #3: Chains: C - Autophagy-related protein 16-1 protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 8046
95% 3 3 8253
90% 3 3 8176
70% 3 3 7823
50% 3 3 7161
40% 3 3 6601
30% 3 3 5898
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.