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Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1
Sequence Clustering and Redundancy Reduction Results
4GDK
Sequence Clusters for the Sequence Entities in PDB 4GDK
Entity #1: Chains: A,D - Ubiquitin-like protein ATG12 protein, length: 91 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 8362
95% 2 3 8488
90% 2 3 8404
70% 2 3 8028
50% 2 3 7327
40% 3 4 5322
30% 3 5 4432
Entity #2: Chains: B,E - Autophagy protein 5 protein, length: 275 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 5 4336
95% 3 5 4954
90% 3 5 4963
70% 3 5 4880
50% 3 5 4613
40% 3 5 4324
30% 3 5 3918
Entity #3: Chains: C,F - Autophagy-related protein 16-1 protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 8411
95% 2 3 8544
90% 2 3 8460
70% 2 3 8085
50% 2 3 7380
40% 2 3 6810
30% 2 3 6062
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.