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Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1
Sequence Clustering and Redundancy Reduction Results
4GDK
Sequence Clusters for the Sequence Entities in PDB 4GDK
Entity #1: Chains: A,D - Ubiquitin-like protein ATG12 protein, length: 91 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 7989
95% 2 3 8190
90% 2 3 8112
70% 2 3 7758
50% 2 3 7100
40% 3 4 5142
30% 3 5 4310
Entity #2: Chains: B,E - Autophagy protein 5 protein, length: 275 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 7642
95% 2 3 7866
90% 2 3 7788
70% 2 3 7466
50% 2 3 6840
40% 2 3 6306
30% 2 3 5633
Entity #3: Chains: C,F - Autophagy-related protein 16-1 protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 8033
95% 2 3 8242
90% 2 3 8164
70% 2 3 7811
50% 2 3 7148
40% 2 3 6593
30% 2 3 5893
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.