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Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1
Sequence Clustering and Redundancy Reduction Results
4GDK
Sequence Clusters for the Sequence Entities in PDB 4GDK
Entity #1: Chains: A,D - Ubiquitin-like protein ATG12 protein, length: 91 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 8231
95% 2 3 8372
90% 2 3 8292
70% 2 3 7921
50% 2 3 7239
40% 3 4 5249
30% 3 5 4386
Entity #2: Chains: B,E - Autophagy protein 5 protein, length: 275 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 5 4263
95% 3 5 4869
90% 3 5 4880
70% 3 5 4801
50% 3 5 4548
40% 3 5 4270
30% 3 5 3869
Entity #3: Chains: C,F - Autophagy-related protein 16-1 protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 8277
95% 2 3 8425
90% 2 3 8345
70% 2 3 7977
50% 2 3 7290
40% 2 3 6725
30% 2 3 5999
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.