Sequence Similarity Clusters for the Entities in PDB 4GCT

Entity #1 | Chains: A,B,C,D
Nucleoid occlusion factor SlmA protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 8122
95 % 3 3 8349
90 % 3 3 8275
70 % 3 3 7920
50 % 6 10 1375
40 % 6 10 1398
30 % 6 10 1376
Entity #2 | Chains: W,Z
DNA (5'-D(*TP*TP*AP*CP*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*CP*GP*TP*AP*A)-3') dna, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.