Sequence Similarity Clusters for the Entities in PDB 4GCT

Entity #1 | Chains: A,B,C,D
Nucleoid occlusion factor SlmA protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 10892
95 % 2 2 10570
90 % 2 2 10411
70 % 2 2 9836
50 % 4 6 2457
40 % 4 6 2442
30 % 4 6 2286
Entity #2 | Chains: W,Z
DNA (5'-D(*TP*TP*AP*CP*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*CP*GP*TP*AP*A)-3') dna, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.