Sequence Similarity Clusters for the Entities in PDB 4GCL

Entity #1 | Chains: A,B,C,D,E,F,G,H
Nucleoid occlusion factor SlmA protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 6248
95 % 6 7 1674
90 % 6 7 1716
70 % 6 7 1751
50 % 9 10 1355
40 % 9 10 1385
30 % 9 10 1363
Entity #2 | Chains: R,T,W,Z
DNA (5'-D(*AP*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*CP*T)-3') dna, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.