Sequence Similarity Clusters for the Entities in PDB 4GCK

Entity #1 | Chains: A,B,C,D
Nucleoid occlusion factor SlmA protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 13473
95 % 1 7 2069 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.0
PDBFlex
90 % 1 7 2120
70 % 1 7 2125
50 % 3 10 1591
40 % 3 10 1599
30 % 3 10 1579
Entity #2 | Chains: W,Z
DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures