Sequence Similarity Clusters for the Entities in PDB 4GCK

Entity #1 | Chains: A,B,C,D
Nucleoid occlusion factor SlmA protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12315
95 % 1 7 2100 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.0
PDBFlex
90 % 1 7 2156
70 % 1 7 2163
50 % 3 10 1587
40 % 3 10 1578
30 % 3 10 1564
Entity #2 | Chains: W,Z
DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures