Sequence Similarity Clusters for the Entities in PDB 4GAW

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Granzyme H protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5091
95 % 4 4 4430 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 4 4 4455
70 % 7 7 3158
50 % 33 34 1021
40 % 1671 1695 4
30 % 1816 1845 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.