Sequence Similarity Clusters for the Entities in PDB 4GAW

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Granzyme H protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 4386
95 % 4 4 4712 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 4 4 4741
70 % 6 6 3739
50 % 35 36 1019
40 % 1840 1873 4
30 % 1853 1887 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures