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Structure of the broadly neutralizing antibody AP33 in complex with its HCV epitope (E2 residues 411-424)
Sequence Clustering and Redundancy Reduction Results
4GAJ
Sequence Clusters for the Sequence Entities in PDB 4GAJ
Entity #1: Chains: H - NEUTRALIZING ANTIBODY AP33 HEAVY CHAIN protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 15668
95% 2 3 13879
90% 5 9 3726
70% 998 1490 2
50% 2068 3090 1
40% 2069 3091 1
30% 2381 3653 1
Entity #2: Chains: L - NEUTRALIZING ANTIBODY AP33 LIGHT CHAIN protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 15669
95% 12 26 822
90% 31 62 272
70% 871 1297 3
50% 2069 3090 1
40% 2070 3091 1
30% 2382 3653 1
Entity #3: Chains: P - Genome polyprotein protein, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.