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Structure of the broadly neutralizing antibody AP33 in complex with its HCV epitope (E2 residues 411-424)
Sequence Clustering and Redundancy Reduction Results
4GAJ
Sequence Clusters for the Sequence Entities in PDB 4GAJ
Entity #1: Chains: H - NEUTRALIZING ANTIBODY AP33 HEAVY CHAIN protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 17027
95% 2 3 14983
90% 7 11 3358
70% 1104 1672 1
50% 2282 3457 1
40% 2283 3458 1
30% 2622 4083 1
Entity #2: Chains: L - NEUTRALIZING ANTIBODY AP33 LIGHT CHAIN protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 17028
95% 15 30 854
90% 35 67 276
70% 951 1445 3
50% 2283 3457 1
40% 2284 3458 1
30% 2623 4083 1
Entity #3: Chains: P - Genome polyprotein protein, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.