Sequence Similarity Clusters for the Entities in PDB 4GAJ

Entity #1 | Chains: H
NEUTRALIZING ANTIBODY AP33 HEAVY CHAIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 20160
95 % 2 3 17571
90 % 8 12 3442
70 % 1387 2145 1
50 % 2870 4435 1
40 % 2870 4435 1
30 % 3332 5225 1
Entity #2 | Chains: L
NEUTRALIZING ANTIBODY AP33 LIGHT CHAIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 20161
95 % 24 39 741
90 % 47 83 247
70 % 1176 1803 2
50 % 2871 4435 1
40 % 2871 4435 1
30 % 3333 5225 1
Entity #3 | Chains: P
Genome polyprotein protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.