Sequence Similarity Clusters for the Entities in PDB 4GAJ

Entity #1 | Chains: H
NEUTRALIZING ANTIBODY AP33 HEAVY CHAIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 19962
95 % 2 3 17400
90 % 7 11 3942
70 % 1370 2109 1
50 % 2836 4363 1
40 % 2836 4363 1
30 % 3292 5147 1
Entity #2 | Chains: L
NEUTRALIZING ANTIBODY AP33 LIGHT CHAIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 19963
95 % 19 34 909
90 % 42 78 267
70 % 1160 1773 2
50 % 2837 4363 1
40 % 2837 4363 1
30 % 3293 5147 1
Entity #3 | Chains: P
Genome polyprotein protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.